Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCTGAAGAAGATGAAAGGAAAAAGAGGCGACGAGAAAGAAATAAGATTGCAGCTGCAAA
((((((((((((((.......&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206486
GeneSymbolATF3
Binding site160,222
Score1.0
Seed1
Au0.544
Energy-22.4
Binding len16
Me-4.906
Phylopstem3.399969378571428
Phylopflank2.8499006625000005
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure