Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTCAGCTGCGGGGAGCTGCAC
.((((((((((((((.(((((&))))))))))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206491
GeneSymbolMAVS
Binding site5507,5531
Score0.846
Seed1
Au0.397
Energy-23.5
Binding len24
Me-4.026
Phylopstem0.1605225888888889
Phylopflank0.031853712500000006
Longest consecutive pairings12
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure