Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCACTTCCGGGGCTGTG
..((((((.(((..((.(((.&))).))..))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206491
GeneSymbolMAVS
Binding site2358,2377
Score0.846
Seed1
Au0.456
Energy-22.4
Binding len19
Me-8.159
Phylopstem0.1692621666666667
Phylopflank0.20504243374999995
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure