Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGACAACCAAAAGTTTAAGCAGTTGCAGA
((((((((((((((((.(((.&))).))))))..........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206540
GeneSymbolCAPZB
Binding site848,879
Score0.923
Seed1
Au0.485
Energy-25.0
Binding len31
Me-3.938
Phylopstem4.904635615384615
Phylopflank5.377911187499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure