Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTCAGGCCTGCTCAGAGACACCGCAGTGCAC
.((((.(((((((((..((((&.))))...)).....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206541
GeneSymbolCAPZB
Binding site232,267
Score0.846
Seed0
Au0.471
Energy-20.6
Binding len27
Me-5.927
Phylopstem0.7514949357142857
Phylopflank0.79339882375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure