Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACAAGCACAGCTTCCGCGC
.((((((((.(.((((((((.&)))))))).).)))))...))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206559
GeneSymbolPOLR1D
Binding site639,662
Score1.0
Seed1
Au0.412
Energy-22.1
Binding len23
Me-8.383
Phylopstem1.710359075
Phylopflank1.2318751199999998
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end7
PositionCDS
2D Structure