Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACCGAGCTGCT
..((((((.((((.((.....&)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206559
GeneSymbolPOLR1D
Binding site1890,1904
Score0.923
Seed1
Au0.426
Energy-18.2
Binding len14
Me-6.87
Phylopstem-0.43999999999999995
Phylopflank-0.21469221249999998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure