Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCACCGCCTCTGCGT
.(((((..((((.(((.((((&)))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206602
GeneSymbolCHN1
Binding site1728,1747
Score0.846
Seed0
Au0.456
Energy-20.5
Binding len19
Me-8.94
Phylopstem4.0071654
Phylopflank3.54621375375
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure