Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCTTATTCGCAGTTGACAT
.(((((((((((..((((((.&))))))....))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206602
GeneSymbolCHN1
Binding site582,605
Score0.846
Seed1
Au0.588
Energy-19.6
Binding len23
Me-5.939
Phylopstem2.977718166666666
Phylopflank2.480053475
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure