Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGAAACCCCCCAGCTGTGAT
(((((((((.((((....(((&)))...))))...))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206616
GeneSymbolEHF
Binding site1971,1994
Score0.846
Seed1
Au0.544
Energy-18.0
Binding len23
Me-6.149
Phylopstem-0.2969604444444444
Phylopflank-0.16401574249999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure