Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTACCCCCAGCTGCT
..(((((((.((..((((((.&)))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001362770
GeneSymbolCSNK2A1
Binding site263,280
Score1.0
Seed1
Au0.515
Energy-20.9
Binding len17
Me-8.345
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure