Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCGTCCGCAGGTTCCACGCCATTCCCCTACAACCCCCTGATCATGCGGCTGCAGG
(((((((((((((((((.((.&.)).)))))))..........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206654
GeneSymbolNCOR2
Binding site7790,7847
Score0.846
Seed1
Au0.324
Energy-27.0
Binding len32
Me-3.938
Phylopstem6.113926555555557
Phylopflank4.722164565
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure