Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGCCACAGCTGCT
..(((((((.((((.......&)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206691
GeneSymbolRFX4
Binding site30,43
Score0.923
Seed1
Au0.368
Energy-19.2
Binding len13
Me-7.168
Phylopstem1.5126473142857144
Phylopflank0.32236623575000006
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end1
Position5UTR
2D Structure