Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAATGCAGCTGTAT
.(((((((((.(((((.....&)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206696
GeneSymbolIRF6
Binding site2544,2559
Score1.0
Seed1
Au0.618
Energy-19.3
Binding len15
Me-6.618
Phylopstem0.5042175666666666
Phylopflank0.3116564537499999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure