Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACCTTGTATCCAGT
..((((.((((((.((((....&)))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001206703
GeneSymbolSP100
Binding site1539,1555
Score0.885
Seed0
Au0.603
Energy-16.1
Binding len16
Me-7.358
Phylopstem0.272577
Phylopflank0.75757591625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure