Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAGAATGTCAGGA
.((((((((....(((((....&)))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001206704
GeneSymbolSP100
Binding site1635,1651
Score0.846
Seed1
Au0.559
Energy-16.9
Binding len16
Me-12.497
Phylopstem1.154392375
Phylopflank0.97437755
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure