Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAACCACAGCTCCAAC
(((.(((((.(((((.(((((&)))))))))).))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001362781
GeneSymbolZSCAN21
Binding site1330,1351
Score0.923
Seed0
Au0.515
Energy-23.2
Binding len21
Me-8.445
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure