Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTACGTGTGCACCAAGTGTGGGAAAGCTTTCAGCCACAGCTCAAA
(((.(((((.(((((.(((((&.)))))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001362781
GeneSymbolZSCAN21
Binding site969,1017
Score0.923
Seed0
Au0.471
Energy-20.9
Binding len21
Me-8.445
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure