Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCTTCCCTCCCAGTCCCAGCCCTGCTTCCGGCTGCGAA
(((((((..(((..(((.(((&.))).)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001362789
GeneSymbolFKBP6
Binding site1241,1284
Score0.923
Seed1
Au0.412
Energy-21.3
Binding len21
Me-9.454
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure