Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCCAGCAGCTGGGT
.(.((((((((((....((((&))))))).))))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206790
GeneSymbolTMPRSS13
Binding site878,896
Score0.846
Seed0
Au0.441
Energy-19.5
Binding len18
Me-7.176
Phylopstem3.5251587272727276
Phylopflank2.25603081875
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end4
PositionCDS
2D Structure