Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGAATGACTGCAGCTT
....((((((((((((..((.&))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206836
GeneSymbolRAB11A
Binding site819,836
Score1.0
Seed0
Au0.618
Energy-20.1
Binding len17
Me-9.547
Phylopstem2.9960866666666663
Phylopflank2.4025804125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure