Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTAGAACTGCAGTTCAAT
(((.((((((((((.((((((&)))))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206836
GeneSymbolRAB11A
Binding site2400,2421
Score0.962
Seed0
Au0.662
Energy-19.8
Binding len21
Me-7.705
Phylopstem0.10151707900000004
Phylopflank0.481356480625
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure