Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTACAACTGCAGTA
.....((((((((((((((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206839
GeneSymbolPTPRZ1
Binding site5122,5139
Score0.923
Seed0
Au0.706
Energy-21.6
Binding len17
Me-13.666
Phylopstem1.531211625
Phylopflank2.8449305849999997
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure