Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTACAGCCGCCCCTGA
...(((..(((((((((((((&)))).)))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206846
GeneSymbolASPM
Binding site120,140
Score1.0
Seed0
Au0.353
Energy-22.2
Binding len20
Me-10.372
Phylopstem1.0594755214285716
Phylopflank0.73466514125
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end8
Position5UTR
2D Structure