Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGAGTAAATACAGCTCTGTGTTCCCTAGCAGCTGCC
..(((((((((((((((....&.)))))))............)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206850
GeneSymbolNLGN4Y
Binding site3547,3587
Score1.0
Seed1
Au0.485
Energy-20.8
Binding len29
Me-4.957
Phylopstem0.7441232518518518
Phylopflank0.8001385925
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure