Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGTTCAGCACATCAGTGCAGCCGTGGCTGA
...((((((((((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206864
GeneSymbolSTRADB
Binding site962,994
Score1.0
Seed0
Au0.515
Energy-23.8
Binding len16
Me-6.515
Phylopstem3.7451757142857143
Phylopflank4.8543157345
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure