Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGACAGCTGAGGGCTGCT
..((((((.(((((((..(((&))).)))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206878
GeneSymbolCTDSP1
Binding site1580,1600
Score0.904
Seed1
Au0.412
Energy-22.6
Binding len20
Me-6.013
Phylopstem-0.9862237999999998
Phylopflank-0.26149649249999996
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure