Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCACCGCCTGGCTGCC
..((((((((((.(((.(((.&))))))))))..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206880
GeneSymbolIRAG1
Binding site1349,1368
Score1.0
Seed1
Au0.324
Energy-21.8
Binding len19
Me-6.246
Phylopstem0.5732075833333333
Phylopflank0.6467322975
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure