Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCCCCCGGCTGCAGA
(((((((((.((..((.((((&)))).)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206881
GeneSymbolIRAG1
Binding site1144,1164
Score0.897
Seed1
Au0.353
Energy-21.6
Binding len20
Me-7.326
Phylopstem0.45811887777777777
Phylopflank0.30054240875
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure