Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTGGGGACATGTGTGTCAGA
..(((((((((.((((......&.))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001206934
GeneSymbolAGER
Binding site497,519
Score0.846
Seed1
Au0.412
Energy-16.6
Binding len15
Me-8.304
Phylopstem0.531537
Phylopflank0.9857893199999996
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure