Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCGTCCATGAGCTGGGCCGCAACCAGCAGCGGCAGG
((((.(((((((((((..(((&.))))))))).))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206938
GeneSymbolTCAF1
Binding site2424,2463
Score0.846
Seed0
Au0.309
Energy-24.8
Binding len22
Me-8.057
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end6
PositionCDS
2D Structure