Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGGGAACCTACAGCTGTG
..(((((((.((((.(..(((&)))..).))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206940
GeneSymbolAGER
Binding site914,935
Score0.846
Seed1
Au0.353
Energy-18.0
Binding len21
Me-6.935
Phylopstem1.8266071428571427
Phylopflank1.5500447175
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure