Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCATTTTCCTGCAGCTGCC
..((((((((((......((.&))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206946
GeneSymbolPICALM
Binding site1,20
Score0.846
Seed1
Au0.388
Energy-20.0
Binding len19
Me-8.071
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure