Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAAGGTTGCACCAACAACCGCTTGGAATGCTGCAAC
(((((((.((((((((..(((&.))).)))))))).......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206947
GeneSymbolPICALM
Binding site1597,1636
Score0.923
Seed1
Au0.471
Energy-23.4
Binding len28
Me-6.251
Phylopstem2.716871
Phylopflank2.5416534051249995
Longest consecutive pairings8
Position of longest consecutive pairings15
Pairings in 3prime end6
PositionCDS
2D Structure