Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACCTGGCTGCC
..(((((((.(((((......&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206961
GeneSymbolPLA1A
Binding site550,563
Score0.923
Seed1
Au0.5
Energy-16.9
Binding len13
Me-6.433
Phylopstem5.350982857142857
Phylopflank4.378704891249999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure