Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTACAACCTCACTGTTATGACTGAGGCTGCAGGGCTGCAAA
(((((((((((((((((((((&)))).)))))))....................)))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206971
GeneSymbolPTPRB
Binding site1000,1045
Score0.846
Seed1
Au0.485
Energy-22.9
Binding len45
Me-3.938
Phylopstem0.7330064954545453
Phylopflank0.7686187124999999
Longest consecutive pairings7
Position of longest consecutive pairings33
Pairings in 3prime end8
PositionCDS
2D Structure