Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTACAACGTGTGGCAT
...((.(((((..(((((((((&)))))))))..))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001206972
GeneSymbolPTPRB
Binding site7742,7762
Score0.846
Seed0
Au0.588
Energy-17.5
Binding len20
Me-13.051
Phylopstem3.805604844444445
Phylopflank3.571576607499999
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure