Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACTGTCAACTGCAGCTGG
...((((((((((((((((((&)))))))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206972
GeneSymbolPTPRB
Binding site4348,4371
Score0.923
Seed0
Au0.544
Energy-23.8
Binding len23
Me-6.515
Phylopstem0.07358598636363635
Phylopflank-0.0971644025
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure