Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTTGAAAACATTCCTACAGCTGGGAGCACAGCTGCT
..((((((((((((((.(((.&.))))))))))......))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206993
GeneSymbolNR1H4
Binding site2262,2301
Score0.923
Seed1
Au0.544
Energy-22.4
Binding len25
Me-4.957
Phylopstem0.89595493
Phylopflank0.55495324125
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end6
Position3UTR
2D Structure