Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAAGACCAGGAAGTTTGAGAAAGCAGCCGCAGCTCAAC
(((.((((((((((((.....&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206999
GeneSymbolCIT
Binding site7611,7652
Score0.923
Seed0
Au0.441
Energy-24.5
Binding len17
Me-6.97
Phylopstem3.9416555750000004
Phylopflank4.09007770125
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure