Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGACACTGCAGCTC
....((((((((((.(((((.&))))).).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001207
GeneSymbolBTF3
Binding site740,758
Score1.0
Seed0
Au0.632
Energy-20.5
Binding len18
Me-10.282
Phylopstem1.5224301363636363
Phylopflank1.8591716887499998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure