Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCATATACTCAGAATCCTGGACAGCAGATTGGAGCCAGTGG
((((((((((..((((.((...&.))..))))..)))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001362843
GeneSymbolEP300
Binding site1175,1219
Score0.949
Seed1
Au0.529
Energy-28.4
Binding len22
Me-10.109
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure