Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCCGCCGCCGCAGTTGTC
..(((((((((((.((..(((&)))...)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001207011
GeneSymbolCNTFR
Binding site228,249
Score1.0
Seed1
Au0.324
Energy-23.8
Binding len21
Me-5.814
Phylopstem2.7613001818181817
Phylopflank1.7449555500000002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure