Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTGCTGCTAAAGTTGCAAG
((((((((..(((.(((((((&))))))).)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001207015
GeneSymbolPTPRR
Binding site2201,2223
Score1.0
Seed1
Au0.647
Energy-20.6
Binding len22
Me-7.093
Phylopstem2.923150625
Phylopflank2.1257898075
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure