Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTTGTGGATGCACTAAGCATTGTCTGCCAGC
..((((((.(((((((......&.))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001207016
GeneSymbolPTPRR
Binding site1382,1415
Score0.923
Seed1
Au0.529
Energy-19.1
Binding len16
Me-6.013
Phylopstem6.065262857142857
Phylopflank3.881943585
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end2
PositionCDS
2D Structure