Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTATCGCCCATCACATTACAGCCAGCACTGTC
..((((.(((((((((((.((&.)).)))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001207016
GeneSymbolPTPRR
Binding site356,390
Score0.923
Seed0
Au0.441
Energy-18.8
Binding len21
Me-6.501
Phylopstem2.21625
Phylopflank1.4023750000000001
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure