Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGCAGCAACAGCTGCAGC
(((((((((..(((((..((.&)).)))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001362843
GeneSymbolEP300
Binding site5773,5793
Score0.872
Seed1
Au0.441
Energy-24.2
Binding len20
Me-8.005
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure