Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAACTGCAGCTCCGGA
(((.(((((((((((.((((.&))))))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001207020
GeneSymbolSHISA8
Binding site624,644
Score0.923
Seed0
Au0.324
Energy-24.2
Binding len20
Me-7.203
Phylopstem0.46172907272727265
Phylopflank0.09689712375
Longest consecutive pairings15
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure