Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCACATCCGGGGCTGCC
..((((((.(((.(((.(((.&))).))).))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001207034
GeneSymbolRNF40
Binding site620,639
Score1.0
Seed1
Au0.397
Energy-24.5
Binding len19
Me-7.303
Phylopstem-0.0016306833333333086
Phylopflank0.43458376749999994
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure