Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTCACGGCTGCGGCGCAAG
((((.(((((((((((.((((&)))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001207034
GeneSymbolRNF40
Binding site3253,3274
Score0.923
Seed0
Au0.412
Energy-24.2
Binding len21
Me-8.057
Phylopstem3.083168654545455
Phylopflank4.0606770975
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure